If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 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'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 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'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 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'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 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'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 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'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 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'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 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'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 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'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 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'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 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'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 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'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 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'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 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'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 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'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 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'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 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'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 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'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 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'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 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'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 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'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 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'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 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'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ), 'gf_id' => 'HOM05D000536', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000536' ), 'data_identifier' => 'HOM05D000536', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000536', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p18540' => 'bna', 'A02p06040' => 'bna', 'A03p09830' => 'bna', 'A03p49470' => 'bna', 'A05p33380' => 'bna', 'A07p13950' => 'bna', 'A08p02260' => 'bna', 'A08p12060' => 'bna', 'A08p28290' => 'bna', 'A09p41540' => 'bna', 'Aa31LG10G2660' => 'aar', 'Aa31LG10G6210' => 'aar', 'Aa31LG5G10150' => 'aar', 'Aa31LG7G7260' => 'aar', 'Aa31sc461G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4107' => 'aag', 'Actinidia05146' => 'ach', 'Actinidia08990' => 'ach', 'Actinidia12381' => 'ach', 'Actinidia12814' => 'ach', 'Actinidia13162' => 'ach', 'Actinidia14286' => 'ach', 'Actinidia19067' => 'ach', 'Actinidia19580' => 'ach', 'Actinidia20381' => 'ach', 'Actinidia24744' => 'ach', 'Actinidia27754' => 'ach', 'Actinidia34970' => 'ach', 'Actinidia40293' => 'ach', 'Ah.01g021580' => 'amhyb', 'Ah.03g137390' => 'amhyb', 'Ah.13g074860' => 'amhyb', 'AL1G60420' => 'aly', 'AL3G28800' => 'aly', 'AL6G31660' => 'aly', 'AL7G25440' => 'aly', 'AL7G39340' => 'aly', 'Aqoxy1G00380' => 'aox', 'Aqoxy1G03892' => 'aox', 'Aqoxy3G03192' => 'aox', 'Aqoxy5G00774' => 'aox', 'Aqoxy7G01615' => 'aox', 'Aqoxy7G02114' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0Q9PJV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W0AQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5Q0AB6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.62CDNH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8L86R3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8XZZ1K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9WZRN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DW8RK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IBJ9WG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J9DBRI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KCC73G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LB6G3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWX564' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R1TXIV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RH60A4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TKGQ4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7S8TD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNPM5I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XX0NXH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YF22WB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YS7DWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z412LG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZNS8M4' => 'arhy', 'AT1G23220' => 'ath', 'AT1G52245' => 'ath', 'AT3G16120' => 'ath', 'AT4G15930' => 'ath', 'AT4G27360' => 'ath', 'AT5G20110' => 'ath', 'ATR0315G147' => 'atr', 'ATR0564G375' => 'atr', 'ATR0693G081' => 'atr', 'ATR0693G415' => 'atr', 'ATR0730G034' => 'atr', 'ATR0796G105' => 'atr', 'ATR1156G077' => 'atr', 'Atru.chr1.733' => 'acertr', 'Atru.chr11.590' => 'acertr', 'Atru.chr2.2670' => 'acertr', 'Atru.chr2.2930' => 'acertr', 'Atru.chr6.1992' => 'acertr', 'Atru.chr7.1210' => 'acertr', 'Atru.chr8.2080' => 'acertr', 'Atru.chr9.2361' => 'acertr', 'AUR62008320' => 'cqu', 'AUR62011093' => 'cqu', 'AUR62011647' => 'cqu', 'AUR62015591' => 'cqu', 'AUR62016475' => 'cqu', 'AUR62018090' => 'cqu', 'AUR62021776' => 'cqu', 'AUR62032013' => 'cqu', 'AUR62033482' => 'cqu', 'AUR62039540' => 'cqu', 'BcaB01g04803' => 'bca', 'BcaB01g04805' => 'bca', 'BcaB01g04806' => 'bca', 'BcaB03g11929' => 'bca', 'BcaB03g14155' => 'bca', 'BcaB04g17163' => 'bca', 'BcaB04g18343' => 'bca', 'BcaB06g25704' => 'bca', 'BcaB06g25705' => 'bca', 'BcaB07g32313' => 'bca', 'BcaC01g01312' => 'bca', 'BcaC01g01314' => 'bca', 'BcaC05g26232' => 'bca', 'BcaC05g28909' => 'bca', 'BcaC06g32975' => 'bca', 'BcaC06g33435' => 'bca', 'BcaC06g35028' => 'bca', 'BcaC07g37939' => 'bca', 'BcaC07g39190' => 'bca', 'BcaC08g43974' => 'bca', 'BcaC09g50580' => 'bca', 'BcaNung03035' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01800' => 'bna', 'BolC1t02295H' => 'bol', 'BolC2t07014H' => 'bol', 'BolC3t13615H' => 'bol', 'BolC3t21375H' => 'bol', 'BolC5t30943H' => 'bol', 'BolC5t33786H' => 'bol', 'BolC7t42576H' => 'bol', 'BolC7t45279H' => 'bol', 'BolC8t48323H' => 'bol', 'BolC8t49819H' => 'bol', 'BraA01t01803Z' => 'bra', 'BraA02t05555Z' => 'bra', 'BraA03t10298Z' => 'bra', 'BraA03t14048Z' => 'bra', 'BraA05t22163Z' => 'bra', 'BraA07t29151Z' => 'bra', 'BraA08t32271Z' => 'bra', 'BraA08t33197Z' => 'bra', 'BraA08t34760Z' => 'bra', 'BraA09t39645Z' => 'bra', 'C01p23490' => 'bna', 'C03p11410' => 'bna', 'C03p90520' => 'bna', 'C05p22450' => 'bna', 'C05p50380' => 'bna', 'C07p20500' => 'bna', 'C07p47520' => 'bna', 'C08p21800' => 'bna', 'CAN.G129.32' => 'can', 'CAN.G162.107' => 'can', 'CAN.G162.64' => 'can', 'CAN.G377.8' => 'can', 'CAN.G438.19' => 'can', 'CAN.G438.21' => 'can', 'CAN.G574.54' => 'can', 'CAN.G628.56' => 'can', 'CAN.G999.13' => 'can', 'CANSAT01G0368' => 'cansat', 'CANSAT11G2354' => 'cansat', 'CANSAT11G2694' => 'cansat', 'CANSAT35G1427' => 'cansat', 'CANSAT56G1719' => 'cansat', 'CANSAT56G3900' => 'cansat', 'CANSAT56G3913' => 'cansat', 'CANSAT78G2174' => 'cansat', 'CANSAT80G2632' => 'cansat', 'CARHR023680' => 'chi', 'CARHR042380' => 'chi', 'CARHR091280' => 'chi', 'CARHR192720' => 'chi', 'CARHR235010' => 'chi', 'CARHR290480' => 'chi', 'Carub.0001s2281' => 'cru', 'Carub.0001s4122' => 'cru', 'Carub.0003s1586' => 'cru', 'Carub.0006s1849' => 'cru', 'Carub.0007s1351' => 'cru', 'Carub.0007s2573' => 'cru', 'Ca_01127_v3' => 'car', 'Ca_01918_v3' => 'car', 'Ca_01965_v3' => 'car', 'Ca_21483_v3' => 'car', 'Ca_21866_v3' => 'car', 'Ca_23009_v3' => 'car', 'Ca_26604_v3' => 'car', 'CBR_g52000' => 'cbr', 'CBR_g55380' => 'cbr', 'CBR_g72665' => 'cbr', 'Cc03_g01640' => 'ccan', 'Cc04_g03100' => 'ccan', 'Cc04_g16020' => 'ccan', 'Cc05_g12130' => 'ccan', 'Cc05_g12740' => 'ccan', 'Cc06_g08740' => 'ccan', 'Cc06_g09840' => 'ccan', 'Cc11_g08070' => 'ccan', 'CDE01G0403' => 'cde', 'CDE02G2324' => 'cde', 'CDE02G3548' => 'cde', 'CDE05G0058' => 'cde', 'CDE05G2524' => 'cde', 'CDE06G0593' => 'cde', 'CDE06G2033' => 'cde', 'CDE07G1071' => 'cde', 'CDE08G0553' => 'cde', 'CDE12G0625' => 'cde', 'Cfa002089' => 'cfa', 'Cfa003351' => 'cfa', 'Cfa014993' => 'cfa', 'Cfa015416' => 'cfa', 'Cfa019029' => 'cfa', 'Cfa020500' => 'cfa', 'Cfa020597' => 'cfa', 'Cfa020598' => 'cfa', 'Ciclev10006088m.g' => 'ccl', 'Ciclev10007063m.g' => 'ccl', 'Ciclev10009401m.g' => 'ccl', 'Ciclev10009966m.g' => 'ccl', 'Ciclev10010023m.g' => 'ccl', 'Ciclev10010778m.g' => 'ccl', 'Ciclev10013050m.g' => 'ccl', 'Ciclev10017915m.g' => 'ccl', 'Ciclev10018018m.g' => 'ccl', 'Ciclev10021550m.g' => 'ccl', 'Ciclev10026831m.g' => 'ccl', 'CiPaw.01G146200' => 'cil', 'CiPaw.01G236400' => 'cil', 'CiPaw.02G080600' => 'cil', 'CiPaw.03G093000' => 'cil', 'CiPaw.03G230000' => 'cil', 'CiPaw.03G242400' => 'cil', 'CiPaw.04G163000' => 'cil', 'CiPaw.05G190800' => 'cil', 'CiPaw.06G049600' => 'cil', 'CiPaw.11G034900' => 'cil', 'CiPaw.11G168400' => 'cil', 'CiPaw.11G177300' => 'cil', 'CiPaw.12G123200' => 'cil', 'ClCG01G006420' => 'cla', 'ClCG01G014250' => 'cla', 'ClCG02G015600' => 'cla', 'ClCG05G006200' => 'cla', 'ClCG06G005020' => 'cla', 'ClCG06G008710' => 'cla', 'ClCG06G016540' => 'cla', 'ClCG09G001980' => 'cla', 'ClCG11G002920' => 'cla', 'ClCG11G018540' => 'cla', 'COL.COLO4_05775' => 'col', 'COL.COLO4_09402' => 'col', 'COL.COLO4_09487' => 'col', 'COL.COLO4_13830' => 'col', 'COL.COLO4_14711' => 'col', 'COL.COLO4_21257' => 'col', 'COL.COLO4_30427' => 'col', 'COL.COLO4_34843' => 'col', 'Cpa.g.sc12.37' => 'cpa', 'Cpa.g.sc16.198' => 'cpa', 'Cpa.g.sc2.224' => 'cpa', 'Cpa.g.sc23.91' => 'cpa', 'Cpa.g.sc27.131' => 'cpa', 'Cpa.g.sc3.327' => 'cpa', 'Cpa.g.sc56.52' => 'cpa', 'Cpa.g.sc75.54' => 'cpa', 'Cpa.g.sc939.2' => 'cpa', 'Cre03.g181150' => 'cre', 'Cre03.g187200' => 'cre', 'Cre12.g527800' => 'cre', 'CsaV3_1G001970' => 'csa', 'CsaV3_1G008070' => 'csa', 'CsaV3_1G024400' => 'csa', 'CsaV3_2G002750' => 'csa', 'CsaV3_3G014810' => 'csa', 'CsaV3_3G034500' => 'csa', 'CsaV3_3G044330' => 'csa', 'CsaV3_5G028260' => 'csa', 'CsaV3_6G023900' => 'csa', 'CsaV3_7G033370' => 'csa', 'CSS0004667' => 'camsi', 'CSS0005510' => 'camsi', 'CSS0008171' => 'camsi', 'CSS0011809' => 'camsi', 'CSS0012992' => 'camsi', 'CSS0014925' => 'camsi', 'CSS0018342' => 'camsi', 'CSS0023906' => 'camsi', 'CSS0033939' => 'camsi', 'CSS0037869' => 'camsi', 'CSS0037949' => 'camsi', 'CSS0038761' => 'camsi', 'CSS0043910' => 'camsi', 'CSS0049917' => 'camsi', 'DCAR_002475' => 'dca', 'DCAR_007320' => 'dca', 'DCAR_013095' => 'dca', 'DCAR_016214' => 'dca', 'DCAR_016524' => 'dca', 'DCAR_017824' => 'dca', 'DCAR_017825' => 'dca', 'DCAR_023293' => 'dca', 'Dinv08349' => 'din', 'Dinv18631' => 'din', 'Dinv19896' => 'din', 'Dinv20168' => 'din', 'Dinv22360' => 'din', 'Dinv26246' => 'din', 'Dinv30258' => 'din', 'Dinv35547' => 'din', 'Dinv36543' => 'din', 'Dinv36647' => 'din', 'Dinv38028' => 'din', 'Dinv41528' => 'din', 'Dinv41618' => 'din', 'Dinv44359' => 'din', 'Duzib052G0143' => 'dzi', 'Duzib068G1309' => 'dzi', 'Duzib084G0493' => 'dzi', 'Duzib093G1217' => 'dzi', 'Duzib150G1540' => 'dzi', 'Duzib151G0729' => 'dzi', 'Duzib168G1357' => 'dzi', 'Duzib168G2109' => 'dzi', 'Duzib170G0650' => 'dzi', 'Duzib187G0872' => 'dzi', 'Duzib192G0713' => 'dzi', 'Duzib205G1168' => 'dzi', 'Duzib212G0170' => 'dzi', 'Duzib235G0235' => 'dzi', 'Duzib235G0458' => 'dzi', 'Duzib251G0309' => 'dzi', 'Duzib268G0283' => 'dzi', 'Duzib268G1889' => 'dzi', 'ECA232G2284' => 'eca', 'ECA232G3014' => 'eca', 'ECA234G1871' => 'eca', 'ECA236G3635' => 'eca', 'ECA240G2050' => 'eca', 'ECA240G3097' => 'eca', 'ECA240G3254' => 'eca', 'ECA247G4034' => 'eca', 'EL10Ac3g06629' => 'bvu', 'EL10Ac4g08150' => 'bvu', 'EL10Ac5g10879' => 'bvu', 'EL10Ac6g14161' => 'bvu', 'EL10Ac8g18621' => 'bvu', 'EL10Ac9g22025' => 'bvu', 'Eucgr.B00387' => 'egr', 'Eucgr.B02724' => 'egr', 'Eucgr.B02947' => 'egr', 'Eucgr.B02950' => 'egr', 'Eucgr.C01031' => 'egr', 'Eucgr.C04183' => 'egr', 'Eucgr.F01075' => 'egr', 'Eucgr.F03035' => 'egr', 'Eucgr.F03318' => 'egr', 'Eucgr.F03359' => 'egr', 'Eucgr.L03352' => 'egr', 'FAN02G4615' => 'fan', 'FAN04G2468' => 'fan', 'FAN05G1913' => 'fan', 'FAN05G2581' => 'fan', 'FAN07G0107' => 'fan', 'FAN08G1897' => 'fan', 'FAN09G1876' => 'fan', 'FAN09G2930' => 'fan', 'FAN11G0788' => 'fan', 'FAN11G1689' => 'fan', 'FAN11G2239' => 'fan', 'FAN12G3024' => 'fan', 'FAN12G3095' => 'fan', 'FAN13G2907' => 'fan', 'FAN16G0691' => 'fan', 'FAN16G2613' => 'fan', 'FAN17G1849' => 'fan', 'FAN17G2272' => 'fan', 'FAN19G0803' => 'fan', 'FAN19G2088' => 'fan', 'FAN21G0981' => 'fan', 'FAN21G2939' => 'fan', 'FAN23G0966' => 'fan', 'FAN23G1909' => 'fan', 'FAN25G0165' => 'fan', 'FAN25G0728' => 'fan', 'FAN25G3274' => 'fan', 'FAN26G0307' => 'fan', 'FAN26G0898' => 'fan', 'FAN28G0052' => 'fan', 'FAN28G1365' => 'fan', 'FvH4_1g03560' => 'fve', 'FvH4_1g04420' => 'fve', 'FvH4_3g03950' => 'fve', 'FvH4_3g20170' => 'fve', 'FvH4_3g21070' => 'fve', 'FvH4_4g18520' => 'fve', 'FvH4_4g33881' => 'fve', 'FvH4_5g15920' => 'fve', 'FvH4_6g12840' => 'fve', 'FvH4_6g31660' => 'fve', 'Glyma.02G070300' => 'gma', 'Glyma.05G031700' => 'gma', 'Glyma.05G230400' => 'gma', 'Glyma.05G235900' => 'gma', 'Glyma.06G270500' => 'gma', 'Glyma.07G138900' => 'gma', 'Glyma.08G001400' => 'gma', 'Glyma.08G037900' => 'gma', 'Glyma.08G043300' => 'gma', 'Glyma.09G043000' => 'gma', 'Glyma.09G043100' => 'gma', 'Glyma.10G099100' => 'gma', 'Glyma.12G134200' => 'gma', 'Glyma.12G218900' => 'gma', 'Glyma.12G223500' => 'gma', 'Glyma.13G168300' => 'gma', 'Glyma.13G277800' => 'gma', 'Glyma.13G357500' => 'gma', 'Glyma.15G015900' => 'gma', 'Glyma.15G150000' => 'gma', 'Glyma.15G150100' => 'gma', 'Glyma.16G151800' => 'gma', 'Glyma.17G095200' => 'gma', 'Glyma.17G116000' => 'gma', 'Gohir.A01G038300' => 'ghi', 'Gohir.A01G069100' => 'ghi', 'Gohir.A01G149200' => 'ghi', 'Gohir.A01G177650' => 'ghi', 'Gohir.A01G221300' => 'ghi', 'Gohir.A02G050200' => 'ghi', 'Gohir.A02G120700' => 'ghi', 'Gohir.A04G015700' => 'ghi', 'Gohir.A04G025650' => 'ghi', 'Gohir.A05G017500' => 'ghi', 'Gohir.A06G063600' => 'ghi', 'Gohir.A07G041600' => 'ghi', 'Gohir.A09G082201' => 'ghi', 'Gohir.A09G213150' => 'ghi', 'Gohir.A09G237900' => 'ghi', 'Gohir.A10G021300' => 'ghi', 'Gohir.A10G127085' => 'ghi', 'Gohir.A10G165700' => 'ghi', 'Gohir.A11G283300' => 'ghi', 'Gohir.A12G082966' => 'ghi', 'Gohir.A12G174700' => 'ghi', 'Gohir.D01G056600' => 'ghi', 'Gohir.D01G141500' => 'ghi', 'Gohir.D01G210200' => 'ghi', 'Gohir.D02G055300' => 'ghi', 'Gohir.D03G060600' => 'ghi', 'Gohir.D04G095600' => 'ghi', 'Gohir.D05G018400' => 'ghi', 'Gohir.D05G362200' => 'ghi', 'Gohir.D06G062300' => 'ghi', 'Gohir.D06G095400' => 'ghi', 'Gohir.D07G045700' => 'ghi', 'Gohir.D09G082000' => 'ghi', 'Gohir.D09G238800' => 'ghi', 'Gohir.D10G022100' => 'ghi', 'Gohir.D10G171900' => 'ghi', 'Gohir.D12G177400' => 'ghi', 'Gorai.001G048800' => 'gra', 'Gorai.002G076700' => 'gra', 'Gorai.002G174400' => 'gra', 'Gorai.002G255900' => 'gra', 'Gorai.003G065100' => 'gra', 'Gorai.005G061200' => 'gra', 'Gorai.006G097700' => 'gra', 'Gorai.006G261500' => 'gra', 'Gorai.007G321600' => 'gra', 'Gorai.008G189800' => 'gra', 'Gorai.009G018800' => 'gra', 'Gorai.009G398300' => 'gra', 'Gorai.009G430500' => 'gra', 'Gorai.010G072600' => 'gra', 'Gorai.010G109900' => 'gra', 'Gorai.011G023200' => 'gra', 'Gorai.011G192000' => 'gra', 'GSVIVG01008092001' => 'vvi', 'GSVIVG01011685001' => 'vvi', 'GSVIVG01014353001' => 'vvi', 'GSVIVG01014443001' => 'vvi', 'GSVIVG01015372001' => 'vvi', 'GSVIVG01015506001' => 'vvi', 'GSVIVG01017066001' => 'vvi', 'GSVIVG01018666001' => 'vvi', 'GSVIVG01034075001' => 'vvi', 'GSVIVG01035125001' => 'vvi', 'HanXRQChr02g0031391' => 'han', 'HanXRQChr02g0045361' => 'han', 'HanXRQChr03g0062531' => 'han', 'HanXRQChr03g0089501' => 'han', 'HanXRQChr06g0180261' => 'han', 'HanXRQChr08g0209201' => 'han', 'HanXRQChr08g0212401' => 'han', 'HanXRQChr09g0242341' => 'han', 'HanXRQChr10g0317881' => 'han', 'HanXRQChr12g0355531' => 'han', 'HanXRQChr12g0377771' => 'han', 'HanXRQChr13g0418081' => 'han', 'HanXRQChr13g0419261' => 'han', 'HanXRQChr16g0500891' => 'han', 'HanXRQChr17g0536091' => 'han', 'Haze_01173' => 'cav', 'Haze_07404' => 'cav', 'Haze_09416' => 'cav', 'Haze_09542' => 'cav', 'Haze_10924' => 'cav', 'Haze_13882' => 'cav', 'Haze_16368' => 'cav', 'Haze_25610' => 'cav', 'Haze_25763' => 'cav', 'Hma1.2p1_0003F.1_g003600' => 'hma', 'Hma1.2p1_0018F.1_g012620' => 'hma', 'Hma1.2p1_0078F.1_g040390' => 'hma', 'Hma1.2p1_0276F.1_g111550' => 'hma', 'Hma1.2p1_0346F.1_g131620' => 'hma', 'Hma1.2p1_0406F.1_g146155' => 'hma', 'Hma1.2p1_0659F.1_g197290' => 'hma', 'Hma1.2p1_0665F.1_g199100' => 'hma', 'Hma1.2p1_0804F.1_g220960' => 'hma', 'Hma1.2p1_0932F.1_g238270' => 'hma', 'Hma1.2p1_1061F.1_g253335' => 'hma', 'Hma1.2p1_1463F.1_g285140' => 'hma', 'Hma1.2p1_1498F.1_g287160' => 'hma', 'Hma1.2p1_1579F.1_g291880' => 'hma', 'Hma1.2p1_1617F.1_g293790' => 'hma', 'Hma1.2p1_1620F.1_g294003' => 'hma', 'Hma1.2p1_2022F.1_g311370' => 'hma', 'Hma1.2p1_2163F.1_g315710' => 'hma', 'HPP92_002151' => 'vpl', 'HPP92_006345' => 'vpl', 'HPP92_013727' => 'vpl', 'HPP92_020323' => 'vpl', 'HPP92_020329' => 'vpl', 'HPP92_024822' => 'vpl', 'Hund02694' => 'sun', 'Hund06626' => 'sun', 'Hund09384' => 'sun', 'Hund24940' => 'sun', 'Hund24955' => 'sun', 'Hund26491' => 'sun', 'Lalb_Chr03g0030371' => 'lal', 'Lalb_Chr05g0222311' => 'lal', 'Lalb_Chr07g0177841' => 'lal', 'Lalb_Chr07g0178841' => 'lal', 'Lalb_Chr09g0331281' => 'lal', 'Lalb_Chr12g0197831' => 'lal', 'Lalb_Chr13g0298071' => 'lal', 'Lalb_Chr14g0373261' => 'lal', 'Lalb_Chr15g0085991' => 'lal', 'Lalb_Chr16g0387761' => 'lal', 'Lalb_Chr18g0054381' => 'lal', 'Lalb_Chr22g0351351' => 'lal', 'Lj1A844T39' => 'lonja', 'Lj1g0010680' => 'lja', 'Lj2g0016195' => 'lja', 'Lj2g0022353' => 'lja', 'Lj2g0027453' => 'lja', 'Lj3g0004187' => 'lja', 'Lj3g0016278' => 'lja', 'Lj3g0020230' => 'lja', 'Lj3P866T44' => 'lonja', 'Lj4g0008428' => 'lja', 'Lj4g0013361' => 'lja', 'Lj4g0016938' => 'lja', 'Lj4g0020082' => 'lja', 'Lj5A58T72' => 'lonja', 'Lj6g0002547' => 'lja', 'Lj6P741T57' => 'lonja', 'Lj7A631G23' => 'lonja', 'Lj9A456T38' => 'lonja', 'Lsat_1_v5_gn_1_11401' => 'lsa', 'Lsat_1_v5_gn_4_102941' => 'lsa', 'Lsat_1_v5_gn_4_106580' => 'lsa', 'Lsat_1_v5_gn_4_12901' => 'lsa', 'Lsat_1_v5_gn_4_81301' => 'lsa', 'Lsat_1_v5_gn_5_103460' => 'lsa', 'Lsat_1_v5_gn_6_96361' => 'lsa', 'Lsat_1_v5_gn_7_106740' => 'lsa', 'Lsat_1_v5_gn_7_45721' => 'lsa', 'Lsat_1_v5_gn_8_58960' => 'lsa', 'Lsat_1_v5_gn_9_96781' => 'lsa', 'Manes.02G197600' => 'mes', 'Manes.03G022100' => 'mes', 'Manes.03G111100' => 'mes', 'Manes.03G116900' => 'mes', 'Manes.03G197600' => 'mes', 'Manes.03G197700' => 'mes', 'Manes.04G129300' => 'mes', 'Manes.06G134400' => 'mes', 'Manes.08G086111' => 'mes', 'Manes.09G097100' => 'mes', 'Manes.11G038400' => 'mes', 'Manes.14G036300' => 'mes', 'Manes.14G130800' => 'mes', 'Manes.15G082601' => 'mes', 'Manes.15G132700' => 'mes', 'Manes.16G114400' => 'mes', 'Manes.17G081701' => 'mes', 'Mapoly0014s0201' => 'mpo', 'Mapoly0081s0048' => 'mpo', 'Mapoly0084s0084' => 'mpo', 'MBI01_g07172_MAGBIO' => 'mbi', 'MBI02_g47449_MAGBIO' => 'mbi', 'MBI04_g07633_MAGBIO' => 'mbi', 'MBI04_g19166_MAGBIO' => 'mbi', 'MBI05_g02656_MAGBIO' => 'mbi', 'MBI07_g12794_MAGBIO' => 'mbi', 'MBI13_g01847_MAGBIO' => 'mbi', 'MBI18_g07610_MAGBIO' => 'mbi', 'MBI18_g25343_MAGBIO' => 'mbi', 'MBI19_g34789_MAGBIO' => 'mbi', 'MCO01G119' => 'mco', 'MCO04G086' => 'mco', 'MCO13G123' => 'mco', 'MD00G1106900' => 'mdo', 'MD02G1034900' => 'mdo', 'MD03G1226300' => 'mdo', 'MD04G1137700' => 'mdo', 'MD05G1325900' => 'mdo', 'MD06G1184500' => 'mdo', 'MD10G1303800' => 'mdo', 'MD11G1244800' => 'mdo', 'MD12G1152600' => 'mdo', 'MD12G1152800' => 'mdo', 'MD13G1030400' => 'mdo', 'MD13G1166300' => 'mdo', 'MD14G1190400' => 'mdo', 'MD15G1182600' => 'mdo', 'MD16G1021100' => 'mdo', 'MD16G1166100' => 'mdo', 'MD17G1192300' => 'mdo', 'Medtr1g031880' => 'mtr', 'Medtr2g101850' => 'mtr', 'Medtr4g107350' => 'mtr', 'Medtr4g114060' => 'mtr', 'Medtr4g120150' => 'mtr', 'Medtr6g087770' => 'mtr', 'Medtr8g104900' => 'mtr', 'Medtr8g464690' => 'mtr', 'MELO3C002224.2' => 'cme', 'MELO3C004518.2' => 'cme', 'MELO3C005289.2' => 'cme', 'MELO3C006677.2' => 'cme', 'MELO3C009221.2' => 'cme', 'MELO3C017141.2' => 'cme', 'MELO3C018185.2' => 'cme', 'MELO3C021317.2' => 'cme', 'MELO3C024248.2' => 'cme', 'MELO3C024627.2' => 'cme', 'Migut.D01020' => 'egut', 'Migut.E00460' => 'egut', 'Migut.G00136' => 'egut', 'Migut.I00101' => 'egut', 'Migut.I00947' => 'egut', 'Migut.J00271' => 'egut', 'Migut.K00474' => 'egut', 'Migut.M00814' => 'egut', 'Migut.M01855' => 'egut', 'MSTRG.10107' => 'ama', 'MSTRG.11412' => 'ama', 'MSTRG.13613' => 'ama', 'MSTRG.15224' => 'ama', 'MSTRG.2143' => 'ama', 'MSTRG.23068' => 'ama', 'MSTRG.9465' => 'ama', 'Nitab4.5_0000003g0150' => 'nta', 'Nitab4.5_0000097g0130' => 'nta', 'Nitab4.5_0000238g0050' => 'nta', 'Nitab4.5_0000297g0140' => 'nta', 'Nitab4.5_0000513g0120' => 'nta', 'Nitab4.5_0000642g0110' => 'nta', 'Nitab4.5_0000758g0040' => 'nta', 'Nitab4.5_0001233g0030' => 'nta', 'Nitab4.5_0001315g0170' => 'nta', 'Nitab4.5_0001551g0060' => 'nta', 'Nitab4.5_0001968g0010' => 'nta', 'Nitab4.5_0002628g0050' => 'nta', 'Nitab4.5_0002859g0040' => 'nta', 'Nitab4.5_0003418g0050' => 'nta', 'Nitab4.5_0003558g0010' => 'nta', 'Nitab4.5_0003688g0050' => 'nta', 'Nitab4.5_0004498g0040' => 'nta', 'Nitab4.5_0007260g0010' => 'nta', 'Nitab4.5_0008033g0010' => 'nta', 'Nitab4.5_0009944g0040' => 'nta', 'Nitab4.5_0012690g0010' => 'nta', 'Nn1g00953' => 'nnu', 'Nn1g01845' => 'nnu', 'Nn1g03879' => 'nnu', 'Nn1g04075' => 'nnu', 'Nn1g06777' => 'nnu', 'Nn2g11705' => 'nnu', 'Nn2g11972' => 'nnu', 'Nn3g18315' => 'nnu', 'Nn4g22985' => 'nnu', 'Nn4g24227' => 'nnu', 'Nn4g24286' => 'nnu', 'Nn4g25774' => 'nnu', 'Nn6g33910' => 'nnu', 'Nn8g39397' => 'nnu', 'Oeu005677.1' => 'oeu', 'Oeu018608.1' => 'oeu', 'Oeu019330.1' => 'oeu', 'Oeu024070.1' => 'oeu', 'Oeu029639.1' => 'oeu', 'Oeu030437.1' => 'oeu', 'Oeu030555.1' => 'oeu', 'Oeu034111.1' => 'oeu', 'Oeu062650.1' => 'oeu', 'Oeu063361.1' => 'oeu', 'Os01g0256400' => 'osa', 'Os01g0555600' => 'osa', 'Os01g0760000' => 'osa', 'Os02g0269200' => 'osa', 'Os02g0580400' => 'osa', 'Os02g0733001' => 'osa', 'Os04g0462600' => 'osa', 'Os06g0492700' => 'osa', 'Peaxi162Scf00015g00003' => 'pax', 'Peaxi162Scf00017g02016' => 'pax', 'Peaxi162Scf00034g00512' => 'pax', 'Peaxi162Scf00065g01531' => 'pax', 'Peaxi162Scf00069g01325' => 'pax', 'Peaxi162Scf00207g01363' => 'pax', 'Peaxi162Scf00231g00252' => 'pax', 'Peaxi162Scf00689g00547' => 'pax', 'Peaxi162Scf00984g00117' => 'pax', 'Peaxi162Scf01216g00054' => 'pax', 'PGR031G1392' => 'pgr', 'PGR031G2502' => 'pgr', 'PGR031G3214' => 'pgr', 'PGR042G1732' => 'pgr', 'PGR083G0126' => 'pgr', 'PGR083G1234' => 'pgr', 'PGR083G1936' => 'pgr', 'PGR102G1519' => 'pgr', 'PGR102G2217' => 'pgr', 'PGR102G3259' => 'pgr', 'PGR142G2867' => 'pgr', 'PGSC0003DMG400002545' => 'stu', 'PGSC0003DMG400007577' => 'stu', 'PGSC0003DMG400011331' => 'stu', 'PGSC0003DMG400012449' => 'stu', 'PGSC0003DMG400019247' => 'stu', 'PGSC0003DMG400020679' => 'stu', 'PGSC0003DMG400024462' => 'stu', 'PGSC0003DMG400032159' => 'stu', 'PGSC0003DMG400033063' => 'stu', 'Phvul.002G312600' => 'pvu', 'Phvul.002G319300' => 'pvu', 'Phvul.003G163300' => 'pvu', 'Phvul.003G195000' => 'pvu', 'Phvul.004G077100' => 'pvu', 'Phvul.005G070900' => 'pvu', 'Phvul.005G168500' => 'pvu', 'Phvul.009G249800' => 'pvu', 'Phvul.009G249900' => 'pvu', 'Phvul.011G138300' => 'pvu', 'Potri.001G124700' => 'ptr', 'Potri.001G401400' => 'ptr', 'Potri.001G407900' => 'ptr', 'Potri.003G052800' => 'ptr', 'Potri.003G108700' => 'ptr', 'Potri.004G034000' => 'ptr', 'Potri.006G091800' => 'ptr', 'Potri.008G133000' => 'ptr', 'Potri.008G219900' => 'ptr', 'Potri.010G108700' => 'ptr', 'Potri.011G120400' => 'ptr', 'Potri.011G126400' => 'ptr', 'Potri.015G067800' => 'ptr', 'Pp3c11_9560' => 'ppa', 'Pp3c13_8460' => 'ppa', 'Pp3c20_3493' => 'ppa', 'Pp3c23_21620' => 'ppa', 'Pp3c26_11770' => 'ppa', 'PRCOL_00000306' => 'pco', 'PRCOL_00001154' => 'pco', 'PRCOL_00002601' => 'pco', 'PRCOL_00005070' => 'pco', 'Prupe.1G132800' => 'ppe', 'Prupe.3G068100' => 'ppe', 'Prupe.4G037500' => 'ppe', 'Prupe.4G183100' => 'ppe', 'Prupe.4G191300' => 'ppe', 'Prupe.5G183300' => 'ppe', 'Prupe.6G263700' => 'ppe', 'Prupe.7G233000' => 'ppe', 'Prupe.7G240100' => 'ppe', 'Psat0s2895g0040' => 'psa', 'Psat1g155680' => 'psa', 'Psat4g025240' => 'psa', 'Psat4g040840' => 'psa', 'Psat4g054520' => 'psa', 'Psat5g246440' => 'psa', 'Psat5g298200' => 'psa', 'Psat6g044880' => 'psa', 'PSO017G1255' => 'pso', 'PSO017G6279' => 'pso', 'PSO170G1145' => 'pso', 'PSO170G5413' => 'pso', 'PSO210G1242' => 'pso', 'PSO210G4617' => 'pso', 'PSO210G5005' => 'pso', 'PSO339G1667' => 'pso', 'PSO384G1938' => 'pso', 'PSO407G0346' => 'pso', 'PSO455G0146' => 'pso', 'PSO478G0552' => 'pso', 'PSO478G3635' => 'pso', 'PSO541G2740' => 'pso', 'PSO591G0036' => 'pso', 'PSO675G7643' => 'pso', 'PSO782G3371' => 'pso', 'PSO832G1793' => 'pso', 'PSO832G2216' => 'pso', 'QL02p043452' => 'qlo', 'QL02p044161' => 'qlo', 'QL02p087871' => 'qlo', 'QL03p034564' => 'qlo', 'QL03p034777' => 'qlo', 'QL03p034780' => 'qlo', 'QL05p021823' => 'qlo', 'QL08p017573' => 'qlo', 'QL08p021512' => 'qlo', 'QL09p005709' => 'qlo', 'QL10p014469' => 'qlo', 'QL12p026597' => 'qlo', 'RcHm_v2.0_Chr1g0349921' => 'rch', 'RcHm_v2.0_Chr2g0089081' => 'rch', 'RcHm_v2.0_Chr2g0090071' => 'rch', 'RcHm_v2.0_Chr2g0138711' => 'rch', 'RcHm_v2.0_Chr3g0464841' => 'rch', 'RcHm_v2.0_Chr4g0423081' => 'rch', 'RcHm_v2.0_Chr4g0443401' => 'rch', 'RcHm_v2.0_Chr5g0006281' => 'rch', 'RcHm_v2.0_Chr5g0033981' => 'rch', 'RcHm_v2.0_Chr5g0036101' => 'rch', 'RcHm_v2.0_Chr7g0180131' => 'rch', 'Rhsim01G0076200' => 'rsi', 'Rhsim01G0076300' => 'rsi', 'Rhsim01G0097800' => 'rsi', 'Rhsim04G0017100' => 'rsi', 'Rhsim04G0162900' => 'rsi', 'Rhsim06G0197500' => 'rsi', 'Rhsim09G0092200' => 'rsi', 'Rhsim12G0160400' => 'rsi', 'RhsimUnG0258200' => 'rsi', 'Sabra04G0019600' => 'sbr', 'Sabra06G0069400' => 'sbr', 'Sabra08G0101600' => 'sbr', 'Sabra08G0151900' => 'sbr', 'Sabra11G0111000' => 'sbr', 'Sabra15G0092700' => 'sbr', 'Sabra16G0263400' => 'sbr', 'SalBow1G6056' => 'sbo', 'SalBow2G0220' => 'sbo', 'SalBow2G2779' => 'sbo', 'SalBow5G0983' => 'sbo', 'SalBow7G2719' => 'sbo', 'Sc03g0009560' => 'sci', 'Sc04g0005270' => 'sci', 'Sc12g0005930' => 'sci', 'Sc12g0009420' => 'sci', 'Sc13g0003310' => 'sci', 'Sc18g0000670' => 'sci', 'Sed0002825' => 'sed', 'Sed0003228' => 'sed', 'Sed0004448' => 'sed', 'Sed0005753' => 'sed', 'Sed0011552' => 'sed', 'Sed0012057' => 'sed', 'Sed0015469' => 'sed', 'Sed0016505' => 'sed', 'Sed0017919' => 'sed', 'Sed0018702' => 'sed', 'Sed0020428' => 'sed', 'Sed0020505' => 'sed', 'Sed0021186' => 'sed', 'Sed0023001' => 'sed', 'Sed0025738' => 'sed', 'SEGI_03964' => 'sgi', 'SEGI_04630' => 'sgi', 'SEGI_07176' => 'sgi', 'SEGI_10418' => 'sgi', 'SEGI_23035' => 'sgi', 'SEGI_25860' => 'sgi', 'SEGI_35149' => 'sgi', 'SEGI_36394' => 'sgi', 'SEGI_38098' => 'sgi', 'SEGI_38273' => 'sgi', 'SGA_v2.0_scaffold139G35394' => 'sas', 'SGA_v2.0_scaffold18G08347' => 'sas', 'SGA_v2.0_scaffold25G10852' => 'sas', 'SGA_v2.0_scaffold4G02005' => 'sas', 'SGA_v2.0_scaffold56G20077' => 'sas', 'SGA_v2.0_scaffold67G22610' => 'sas', 'SGA_v2.0_scaffold73G24270' => 'sas', 'SMO145G0273' => 'smo', 'SMO329G0070' => 'smo', 'SMO361G0543' => 'smo', 'SMO365G0002' => 'smo', 'Solyc01g005460.4' => 'sly', 'Solyc01g066590.3' => 'sly', 'Solyc03g113540.3' => 'sly', 'Solyc03g120690.3' => 'sly', 'Solyc06g071180.3' => 'sly', 'Solyc07g063180.3' => 'sly', 'Solyc07g063610.4' => 'sly', 'Solyc12g006630.2' => 'sly', 'Solyc12g044240.3' => 'sly', 'Sopen01g001470' => 'spe', 'Sopen01g028140' => 'spe', 'Sopen03g008040' => 'spe', 'Sopen03g032590' => 'spe', 'Sopen03g039510' => 'spe', 'Sopen06g027490' => 'spe', 'Sopen07g031370' => 'spe', 'Sopen07g031790' => 'spe', 'Sopen12g002580' => 'spe', 'Sopen12g022480' => 'spe', 'Sp1g20690' => 'spa', 'Sp3g14480' => 'spa', 'Sp5g25880' => 'spa', 'Sp6g24300' => 'spa', 'Sp7g14380' => 'spa', 'Sp7g25290' => 'spa', 'TAR365G0508' => 'tar', 'TAR371G0401' => 'tar', 'TAR383G0639' => 'tar', 'TAR622G1123' => 'tar', 'TAR624G1121' => 'tar', 'TAR625G1232' => 'tar', 'TAR626G0409' => 'tar', 'TAR626G0923' => 'tar', 'TAR629G1597' => 'tar', 'TAR629G2016' => 'tar', 'TAR629G2063' => 'tar', 'TAR633G2035' => 'tar', 'TAR636G1218' => 'tar', 'THA.LOC104802579' => 'tha', 'THA.LOC104809129' => 'tha', 'THA.LOC104815103' => 'tha', 'THA.LOC104817983' => 'tha', 'THA.LOC104821782' => 'tha', 'THA.LOC104822993' => 'tha', 'Thecc.02G289900' => 'tca', 'Thecc.03G155200' => 'tca', 'Thecc.04G287700' => 'tca', 'Thecc.05G030300' => 'tca', 'Thecc.06G091800' => 'tca', 'Thecc.06G200100' => 'tca', 'Thecc.07G070500' => 'tca', 'Thecc.07G083600' => 'tca', 'Thecc.09G040500' => 'tca', 'Thecc.09G108100' => 'tca', 'Thecc.09G123600' => 'tca', 'Thecc.K0000600' => 'tca', 'Thhalv10009103m.g' => 'esa', 'Thhalv10014655m.g' => 'esa', 'Thhalv10022334m.g' => 'esa', 'Thhalv10026570m.g' => 'esa', 'Thhalv10027370m.g' => 'esa', 'TPR.G10043' => 'tpr', 'TPR.G10718' => 'tpr', 'TPR.G27307' => 'tpr', 'TPR.G3203' => 'tpr', 'TPR.G32674' => 'tpr', 'TPR.G32879' => 'tpr', 'TPR.G36864' => 'tpr', 'TPR.G37145' => 'tpr', 'TPR.G38458' => 'tpr', 'TWI09G0576' => 'twi', 'TWI12G0234' => 'twi', 'TWI18G0976' => 'twi', 'TWI34G0627' => 'twi', 'TWI39G0213' => 'twi', 'TWI39G0420' => 'twi', 'TWI53G0834' => 'twi', 'TWI60G1120' => 'twi', 'TWI63G0438' => 'twi', 'TWI73G0850' => 'twi', 'TWI74G0860' => 'twi', 'unitig_26.g8787' => 'ugi', 'unitig_26.g9634' => 'ugi', 'unitig_27.g25313' => 'ugi', 'unitig_32.g10640' => 'ugi', 'unitig_749.g13455' => 'ugi', 'unitig_750.g28491' => 'ugi', 'unitig_88.g27712' => 'ugi', 'vmacro08175' => 'vma', 'vmacro08629' => 'vma', 'vmacro09569' => 'vma', 'vmacro10683' => 'vma', 'vmacro11848' => 'vma', 'vmacro14178' => 'vma', 'vmacro16577' => 'vma', 'vmacro16967' => 'vma', 'vmacro20599' => 'vma', 'vmacro20712' => 'vma', 'vmacro22447' => 'vma', 'VMungo0251G2456' => 'vmu', 'VMungo0464G1315' => 'vmu', 'VMungo1080G0032' => 'vmu', 'VMungo1127G0190' => 'vmu', 'VMungo1215G0933' => 'vmu', 'VMungo1215G1921' => 'vmu', 'VMungo1309G0043' => 'vmu', 'VMungo1309G0888' => 'vmu', 'Zm00001eb080560' => 'zma', 'Zm00001eb127760' => 'zma', 'Zm00001eb152480' => 'zma', 'Zm00001eb183270' => 'zma', 'Zm00001eb190180' => 'zma', 'Zm00001eb237570' => 'zma', 'Zm00001eb245220' => 'zma', 'Zm00001eb253710' => 'zma', 'Zm00001eb333540' => 'zma', 'Zm00001eb342300' => 'zma' ) $gf_id = 'HOM05D000536' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000536' ) $data_identifier = 'HOM05D000536' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 19, 'aar' => (int) 5, 'aag' => (int) 1, 'ach' => (int) 13, 'amhyb' => (int) 3, 'aly' => (int) 5, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 22, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 8, 'cde' => (int) 10, 'cfa' => (int) 8, 'ccl' => (int) 11, 'cil' => (int) 13, 'cla' => (int) 10, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 3, 'csa' => (int) 10, 'camsi' => (int) 14, 'dca' => (int) 8, 'din' => (int) 14, 'dzi' => (int) 18, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 11, 'fan' => (int) 31, 'fve' => (int) 10, 'gma' => (int) 24, 'ghi' => (int) 37, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 18, 'vpl' => (int) 6, 'sun' => (int) 6, 'lal' => (int) 12, 'lonja' => (int) 6, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 17, 'mpo' => (int) 3, 'mbi' => (int) 10, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 8, 'cme' => (int) 10, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 21, 'nnu' => (int) 14, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 13, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 9, 'psa' => (int) 8, 'pso' => (int) 19, 'qlo' => (int) 12, 'rch' => (int) 11, 'rsi' => (int) 9, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 6, 'sed' => (int) 15, 'sgi' => (int) 10, 'sas' => (int) 7, 'smo' => (int) 4, 'sly' => (int) 9, 'spe' => (int) 10, 'spa' => (int) 6, 'tar' => (int) 13, 'tha' => (int) 6, 'tca' => (int) 12, 'esa' => (int) 5, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb342300' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1